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Image Search Results
Journal: Nucleic Acids Research
Article Title: DNA targeting by Clostridium cellulolyticum CRISPR–Cas9 Type II-C system
doi: 10.1093/nar/gkz1225
Figure Lengend Snippet: Determination of CcCas9 PAM sequence using plasmid transformation interference screening. ( A ) A scheme of the bacterial interference screen experiment. Escherichia coli cells carrying the CcCas9 locus were transformed by PUC19-based library carrying the protospacer sequence flanked by seven randomized nucleotides and plated on ampicillin containing plates. The presence of an interference-proficient PAM decreases the frequency of plasmids with this PAM among ampicillin-resistant colonies. Comparison of PAM representation in CcCas9 locus carrying cells and in control cells without the CcCas9 locus reveals depleted PAM sequences and allows one to deduce the PAM consensus. ( B ) Clostridium cellulolyticum CRISPR–Cas Type II-C system PAM sequence logo determined by plasmid transformation interference screening.
Article Snippet: This fragment was assembled with PUC19 fragment synthesized through PCR using primers PUC19_F and
Techniques: Sequencing, Plasmid Preparation, Transformation Assay, CRISPR